A series of novel fluorinated thieno[2,3-dlpyrimidine derivatives incorporating 1,3,4-thiadiazole were synthesized by a facile microwave-assisted procedure,including the cyclization of 2-aminothiophene-3-carbonitrile with trifluoroacetic acid,chlorination and nucleophilic substitution reaction.This protocol offered such advantages as mild reaction conditions,short reaction time,simple purification and good yields.The structures of the products were characterized by 1H NMR,MS,elemental analysis and X-ray diffraction.